rnaglib.data_loading
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Tools for loading and creating collections of RNAs.
RNA Dataset¶
This is the main object used for holding collections of RNAs. The RNAdataset
object draws from a database.
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This class is the main object to hold the core RNA data annotations. |
Loading¶
Tools for loading RNAs stored in an RNADataset
batch-wise for deep learning models.
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Wrapper for collate function, so we can use different node similarities. |
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Fetch a loader object for a given dataset. |
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This is to just make an inference over a list of graphs. |
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This turns a graph dataloader or dataset into an edge data loader generator. |
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Dataloader that yields base pairs |